BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034C09LP1|AL429877
(842 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1706 1513 0.0
>3x_Contig1706
Length = 16303
Score = 1513 bits (762), Expect = 0.0
Identities = 829/842 (98%), Gaps = 8/842 (0%)
Strand = Plus / Minus
Query: 1 atctctttgaacmtaagggagacgaatatgtctcgttagtactgaattcatgagagatat 60
|||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 6329 atctctttgaacctaagggagacgaatatgtctc-tta-tactgaattcatgagagatat 6272
Query: 61 catagcggcattatgcggtaaaagattgcaatacagcgttcgaaatcagacaatatgtgt 120
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6271 catagcggcattat-cggtaaaagattgcaatacagcgttcgaaatcagacaatatgt-t 6214
Query: 121 tggtttttcaaccgaattagacaaaggacagtmatggctcgtgcgttacatgcaatcata 180
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 6213 tggtttttcaaccgaattagacaaaggacagtcatggctcgtgcgttac-tgcaatcata 6155
Query: 181 tttaattagagaagacaccatcttagacaagtttcggtttaacacgttcaaggatatgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6154 tttaattagagaagacaccatcttagacaagtttcggtttaacacgttcaaggatatgca 6095
Query: 241 cctttacgagttctcattagcaggaacagcattgtacgatgtaatatccagccgcgagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6094 cctttacgagttctcattagcaggaacagcattgtacgatgtaatatccagccgcgagca 6035
Query: 301 aacaacagatcgcgataatatgatagaagccttgaatgaactctcatattgcctccttcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6034 aacaacagatcgcgataatatgatagaagccttgaatgaactctcatattgcctccttcg 5975
Query: 361 ttggtatcaaaatatgccacaaaattcatgtagagcatcggcaaggatttaatagactat 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5974 ttggtatcaaaatatgccacaaaattcatgtag-gcatcggcaaggatttaatagactat 5916
Query: 421 tactcgactgggactccgttcaagcgcaatttgagctatatgaaacccaatggcaatcaa 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5915 tactcgactgggactccgttcaagcgcaatttgagcaatatgaaacccaatggcaatcaa 5856
Query: 481 tgggaattgtagatagcattacaaacatggggaatatcccattgatgccagtatcaacat 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5855 tgggaattgtagatagcattacaaacatggggaatatcccattgatgccagtttcaacat 5796
Query: 541 ggtattatacactacaaagttgcttatgatgatagaattcactttagaaggatttcattt 600
|| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5795 gg-att-tacactacaaagttgcttatgatgatagaagtcactttagaaggatttcattt 5738
Query: 601 ggaagtttacaagccttgggaatcctttactcagtactggttctgttattacttgtcgag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5737 ggaagtttacaagccttgggaatcctttactcagtactggttctgttattacttgtcgag 5678
Query: 661 tcacttggaatcaaacttgaaaagattgcacgagtttctgttgcagaagatcagttacat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5677 tcacttggaatcaaacttgaaaagattgcacgagtttctgttgcagaagatcagttacat 5618
Query: 721 tttgaattacaataagagaataaagaaactcaaggccggcgaaaagaaagagaatgctaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5617 tttgaattacaataagagaataaagaaactcaaggccggcgaaaagaaagagaatgctaa 5558
Query: 781 agcgcgctatagacatttaacagataatgttttacctcaactaagactaaacgagagaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5557 agcgcgctatagacatttaacagataatgttttacctcaactaagactaaacgagagaac 5498
Query: 841 tg 842
||
Sbjct: 5497 tg 5496
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5799
Number of Sequences: 1807
Number of extensions: 5799
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 842
length of database: 10,358,551
effective HSP length: 16
effective length of query: 826
effective length of database: 10,329,639
effective search space: 8532281814
effective search space used: 8532281814
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)